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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942886.1_cds_XP_016486220.1_77079
CDS Infomation

[gene=LOC107806565] [db_xref=GeneID:107806565] [protein=putative UDP-rhamnose:rhamnosyltransferase 1] [protein_id=XP_016486220.1] [location=12080..13510] [gbkey=CDS]
Sequence

ATGAAGAAAGACAGTATCCACGTTGTAATGGTGCCATGGTTAGCATTTGGTCACCTGCAG
CCATTTTTCCAACTCTCCGTAGCCTTGGCCAAAGAAAAAGTTCATGTCTCTTTCCTTTCC
ACTCCCAGAAACATTAAGAGACTCCCTAAACTTCCTCCTAACTTAGCACCACTAGTAAAT
CTAGTAGAATTTCCACTGCCATCAGTCGACGGTAGCCCTTTGCCTGCTGATGCTGAGGCT
AGTGTAGACATTTCTGCTGATCAAATGGAGTATTTATACCAAGCTTTTGATCTCCTTCAA
GAACCTGTCAAAAACTTCATTGCTGATAAAAAAACTCATTGGGTCATCGCTGATTTCGTC
CCCGATTGGGTGGCTGATATCGCTCGCGAACTTAACATCCCCCTCCTTAAATTCAGTGTC
TTCACTGCTTCTTCACGGGTCTTCTTCGGGCCCCCAAAACCTAGAACCCAGCCCGGTCAA
GTTAAAAATGGATCAAAGCCATTGCATGAACTTTTGGTATCACCACCACCATGGGTGGAT
TTCCCGTCGATGGTTGCTTTCCGGAAATATGAAGCTCTAGATCTAATTTCTATCCTGCGT
GCAGAAAATGAATCGCGCGAAACTTTACTGGGACATGCTGCCGTAGTAGAAGGCTCATGT
AGAGCTGTGGCTATACGTACTTGCATGGAATTTGAAGGTGATTACTTGGATACATATAAC
AAAGTCGCAGGTAAGCCAGTGATTCCGATAGGTTTGCTACCACCGAAAGAATTACCGGCG
AATGAAAGAACTCTTGCTTGTCATCCAAATTGGCAGAAGATCTCTAAATGGCTTGACGAA
CAAAAGCCAAGGTCGGTTGTGTTTGTGGGATTCGGAAGCGAATGTAAACTTACCAAGAAT
CAAGTATATGAAATAGCAAACGGAGTACAACTTTCAGGACTACCGTTTTTGTGGATACTA
CAAAAGCCCAGTTGGGCTTTGAACGACGTTGATGCTTTGCCATCAGGTTTTGGCGCCGCA
ACGGAGGGGAGAGGGTTGGTGCACATTGGCTGGGCACCACAGAAGGAGATTCTTGCACAT
CCGTCCATTGGAGGATCCTTATTTCATGGAGGATGGGGTTCAGCCATTGAAACTTTACAA
CATGGCCATGTTCTTGTGGTGCTGCCTTTTGTTTTTGACCAGGGATTGAATGCAAGATTG
CTAGTAGAAAAAGGTGTGGCAATTGAAGTGAGGAGGAACGAAGAAGATGGATCGTTTAGT
GGAAATGACATAGCAACGTCATTAAGAGAAGCGATAGTTTCTGAGGAAGGGGAAGAGCTT
AGAGCTCGAGCAAGAAAAGCTGCTGCTATTTTTGGAGACCAGAAGCTTCATGACTCCTAT
GTCAAAAACTTTGTTGAGTATATGAGAAGTAACGGTGAGATGAAGGTTTAG

Peptide Sequence

PEP ID

XP_016486220.1
PEP Infomation

PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Nicotiana tabacum]
Sequence

MKKDSIHVVMVPWLAFGHLQPFFQLSVALAKEKVHVSFLSTPRNIKRLPKLPPNLAPLVN
LVEFPLPSVDGSPLPADAEASVDISADQMEYLYQAFDLLQEPVKNFIADKKTHWVIADFV
PDWVADIARELNIPLLKFSVFTASSRVFFGPPKPRTQPGQVKNGSKPLHELLVSPPPWVD
FPSMVAFRKYEALDLISILRAENESRETLLGHAAVVEGSCRAVAIRTCMEFEGDYLDTYN
KVAGKPVIPIGLLPPKELPANERTLACHPNWQKISKWLDEQKPRSVVFVGFGSECKLTKN
QVYEIANGVQLSGLPFLWILQKPSWALNDVDALPSGFGAATEGRGLVHIGWAPQKEILAH
PSIGGSLFHGGWGSAIETLQHGHVLVVLPFVFDQGLNARLLVEKGVAIEVRRNEEDGSFS
GNDIATSLREAIVSEEGEELRARARKAAAIFGDQKLHDSYVKNFVEYMRSNGEMKV

Transcript Sequence

Gene sequence data has not been registered.